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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922171.1_cds_XP_016470970.1_63364
CDS Infomation

[gene=LOC107793192] [db_xref=GeneID:107793192] [protein=DEAD-box ATP-dependent RNA helicase 22] [protein_id=XP_016470970.1] [location=complement(join(1790..1867,2173..2325,2725..3046,3436..3857,3945..4067,4233..4517,6663..6944))] [gbkey=CDS]
Sequence

ATGATTTTACAGCACTCAATTTCCATCTGTAAACTATGGAGGCTGTCATCTACACCAAAC
CGCTTCTTGTTCCGACCCTCTGCTGCTACTTATACTTGCCAACCACAGTGTTGTCGAATC
AGAGCATTTGGGTCTGCTGTTTCAGCAGCCAAAGTTGCTGATACGAATCAAAATGAGACT
TTTTTTGCTGAAGAAAGTGTTTCTTGGACCTCTTTGGGTGTTTCAGATTCATTATGTCGT
GCTCTATCCAGTATTGGCCTTCATAGACCCTCTTTAATTCAGGCGACTTGTATTCCAAGT
ATACTTTCAGGTGCTGATGTGGTGGTTGCTGCAGAGACTGGTAGCGGCAAGACTCATGGT
TACCTAGTGCCGTTGATTGATAAGCTATGCCAATTGTCTGATAATTCAGGGGCTATTGCT
GATCAGGATGTCAGGAAGCACCATCGTCTTTCTCTTGTTCTTTGCCCCAATGTTATGTTA
TGCGAGCAAGTGGTTCGAATGGCTAATAGTCTTTGTAATGATAGTGGTAAACCACTTCTC
GGGGTTGCAGCTGTTTGTGGTCGACAGGTCTGGCCTGTAAAAGAACCAGATGTAATGGTG
TCGACGCCGGCAGCACTTTTAAATTATCTCTACTCTATAGATCCAGAAAGGCGAAGACGT
TCAGAGTTTATACGTAGTGTTAAATATGTGGTTTTTGACGAGGCAGATATGCTGCTTTGT
GGAAGTTTCCAGAACCAAGTGGTCCGACTTATAAATATGTTTCGTTTTGATGAGAAGCAG
TTATCTCGTTCTAAAAATTCGGAACCTGAGATGTCATCGACTTCAGATTTGGAAGAGTTT
AGAGACCTAAAAGCAGATTATGGTGAAGATGAAATTGAAGAAGAAGATACTGAAGTTGGT
GAGGATGGTGCAAATTTAGAAGCCGACACGAAGGGGTTAAAGAGAAAAGATTGGCGAAGA
GTGAGAAAGATATATGAGCGGAGCAAGCAGTACATTTTTGTTGCAGCTACTCTTCCTGAA
AATGGGAAGAGAACTGCTGGAGGAGTTTTGAAGCGGATGTTTCCTGATGCTAGATGGGTT
AGTGGAAATTATCTTCATCAGCACAGCCCAAGGTTGGAGCAGAGGTGGATTGAAGTTTCA
GTTGATACCCAAGTGGATGCTCTCATCGATGCTGTAAAAAATGGAGATTCTGTGGTAGAT
AGTGTTCCTGGAGTGCTCCGAACCATGGTCTTTGCAAATACTGTTGAGGCTGTGGAAGCT
GTTGCTAAAATCTTGACAGGAGCAGGGCTTGAATGTTTCCGCTACCATAGTGATAGCTCT
TTGGAGGAGCGCACACAGAATTTACTTGATTTCCAGCAGAAAGGTGGTGTTTTTGTGTGC
ACTGATGCTGCAGCACGTGGTCTTGACATTCCAAATATTTCACATGTTATTCAGGCGGAG
TTTGCCACATCTGCTGTAGATTTTTTGCACAGGGTTGGTCGTACAGCGAGAGCAGGCCAA
CCTGGCCTCGTTACAAGTCTCTATAGAGAATCAAACCGCGATCTCGTTGCTGCCATTCGT
CTAGCAGAAAAAATTGAAGAACCAGTGGAGAAGGCATTTAGCAGAAAAAGGAGCTTTCGC
AATAAAATCAAGAAAAGAGGCAGAGAAGCTTCCCCCATGAGGTGA

Peptide Sequence

PEP ID

XP_016470970.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 22 [Nicotiana tabacum]
Sequence

MILQHSISICKLWRLSSTPNRFLFRPSAATYTCQPQCCRIRAFGSAVSAAKVADTNQNET
FFAEESVSWTSLGVSDSLCRALSSIGLHRPSLIQATCIPSILSGADVVVAAETGSGKTHG
YLVPLIDKLCQLSDNSGAIADQDVRKHHRLSLVLCPNVMLCEQVVRMANSLCNDSGKPLL
GVAAVCGRQVWPVKEPDVMVSTPAALLNYLYSIDPERRRRSEFIRSVKYVVFDEADMLLC
GSFQNQVVRLINMFRFDEKQLSRSKNSEPEMSSTSDLEEFRDLKADYGEDEIEEEDTEVG
EDGANLEADTKGLKRKDWRRVRKIYERSKQYIFVAATLPENGKRTAGGVLKRMFPDARWV
SGNYLHQHSPRLEQRWIEVSVDTQVDALIDAVKNGDSVVDSVPGVLRTMVFANTVEAVEA
VAKILTGAGLECFRYHSDSSLEERTQNLLDFQQKGGVFVCTDAAARGLDIPNISHVIQAE
FATSAVDFLHRVGRTARAGQPGLVTSLYRESNRDLVAAIRLAEKIEEPVEKAFSRKRSFR
NKIKKRGREASPMR

Transcript Sequence

Gene sequence data has not been registered.